deepbgc:使用深度学习进行BGC检测和分类

上传者: 42115074 | 上传时间: 2025-10-29 18:34:24 | 文件大小: 557KB | 文件类型: ZIP
DeepBGC:生物合成基因簇的检测和分类 DeepBGC使用深度学习来检测细菌和真菌基因组中的BGC。 DeepBGC使用双向长期短期记忆递归神经网络和Pfam蛋白域的word2vec样载体嵌入。 使用随机森林分类器预测产品类别和检测到的BGC的活性。 :pushpin: 消息 :pushpin: DeepBGC 0.1.23:预测BGCs现在可以在antiSMASH使用JSON输出文件被上传用于可视化 根据以下说明,照常安装和运行DeepBGC 上传antismash.json从DeepBGC输出文件夹使用“上传额外的注释” 页 预测的BGC区域及其预测分数将与antiSMASH BGC一起显示 刊物 用于生物合成基因簇预测的深度学习基因组挖掘策略Geoffrey D Hannigan,David Prihoda等人,《核酸研究》,gkz654, //doi.org/10.1093/nar/gkz654 使用

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