saturationGenomeEditing_pipeline

上传者: 42165583 | 上传时间: 2025-09-16 21:24:26 | 文件大小: 393KB | 文件类型: ZIP
饱和度GenomeEditing_pipeline README_BRCA1_SGE_custom_scripts.txt 此自述文件描述了BRCA1 SGE数据处理脚本。 所有测序均在Illumina NextSeq或MiSeq机器上进行,并使用Illumina的bcl2fastq v2.16进行处理。 生成的fastq.gz文件可下载。 提供了用于记录执行的分析的代码。 请参阅本文的“方法”部分以获取更多详细信息。 用于分析的程序:bcl2fastq v2.16 Python 2.7.3 SeqPrep(可从)fastqc v0.11.3 EMBOSS v6.4.0 R v3.1.3 RStudio v1.0.153 分析中使用的自定义python脚本如下: run_seqprep_BRCA1_pipeline.py run_remove_n_bases.py run_c

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